analysis
get_topic_disco(beta, topics='all', reference=None, topn_genes=20, ncores=20)
summary
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
beta |
_type_
|
Feature by topic returned by STAMP |
required |
topics |
str
|
Which topics to run disco on . Defaults to "all". |
'all'
|
reference |
_type_
|
Reference to use. None sets to all reference. Defaults to None. |
None
|
topn_genes |
int
|
How many top genes to run analysis on. Defaults to 20. |
20
|
ncores |
int
|
Number of cores to use. Defaults to 20. |
20
|
Returns:
| Name | Type | Description |
|---|---|---|
_type_ | A dictionary with the topics and top associated genesets |